Integrating Alembic with SQLAlchemy

I’m looking at a way to integrate Alembic with SQLAlchemy. What I need is a way so that Alembic detects any changes I make in automatically and updates it in the MySQL database when I run alembic revision -m "<message_here>" and alembic upgrade head.

Here is what I have at the moment.

This is my application directory structure.


The contains the following.

from sqlalchemy import Column, Integer, String
from sqlalchemy.ext.declarative import declarative_base

Base = declarative_base()

class User(Base):
    """ `User` stores the basic info about a user
    __tablename__ = 'user'
    id = Column(Integer, primary_key=True)
    name = Column(String(255), nullable=False)
    phone = Column(String(15), nullable=False)

I have configured my alembic.ini with my database credentials at sqlalchemy.url

I have the following in my

from __future__ import with_statement
from alembic import context
from sqlalchemy import engine_from_config, pool
from logging.config import fileConfig
from myapplication import models

# this is the Alembic Config object, which provides
# access to the values within the .ini file in use.
config = context.config

# Interpret the config file for Python logging.
# This line sets up loggers basically.

# add your model's MetaData object here
# for 'autogenerate' support
# from myapp import mymodel
# target_metadata = mymodel.Base.metadata
target_metadata = models.Base.metadata

# other values from the config, defined by the needs of,
# can be acquired:
# my_important_option = config.get_main_option("my_important_option")
# ... etc.

def run_migrations_offline():
    """Run migrations in 'offline' mode.

    This configures the context with just a URL
    and not an Engine, though an Engine is acceptable
    here as well.  By skipping the Engine creation
    we don't even need a DBAPI to be available.

    Calls to context.execute() here emit the given string to the
    script output.

    url = config.get_main_option("sqlalchemy.url")

    with context.begin_transaction():

def run_migrations_online():
    """Run migrations in 'online' mode.

    In this scenario we need to create an Engine
    and associate a connection with the context.

    engine = engine_from_config(

    connection = engine.connect()

        with context.begin_transaction():

if context.is_offline_mode():

But when the run the migration using

alembic revision -m "initial"

It says


But when I open the migrations/versions/, this is what I see.


Revision ID: 2d9d8de1aa80
Revises: None
Create Date: 2013-02-23 12:21:52.389906


# revision identifiers, used by Alembic.
revision = '2d9d8de1aa80'
down_revision = None

from alembic import op
import sqlalchemy as sa

def upgrade():

def downgrade():

The version file has nothing about the tables I was expecting it to create and later sync with MySQL when I run the command alembic upgrade head. How do I configure Alembic so that when I run the alembic revision command, It picks the schema from and generates a version file? I think I am missing something trivial here. Not sure what it is!

Best answer

You want to run the revision subcommand with the –autogenerate flag so it inspects the models for changes.

alembic revision --autogenerate -m "some message"

Make sure you’re aware of the limitations of the autogenerate option.